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locks; strict;
comment	@# @;


1.11
date	2025.03.06.01.19.05;	author bacon;	state Exp;
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1.10
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1.9
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1.8
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1.7
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desc
@@


1.11
log
@Multiple packages: OWNER -> MAINTAINER
@
text
@# $NetBSD: Makefile,v 1.10 2024/11/29 15:28:16 bacon Exp $

DISTNAME=	vcf-split-0.1.5.19
CATEGORIES=	biology
MASTER_SITES=	${MASTER_SITE_GITHUB:=auerlab/}
GITHUB_TAG=	1a8ab827c0e08172d3c1309ea80436c690b94608

MAINTAINER=	bacon@@NetBSD.org
HOMEPAGE=	https://github.com/auerlab/vcf-split
COMMENT=	Split a multi-sample VCF into single-sample VCFs
LICENSE=	2-clause-bsd

MAKE_FLAGS+=	MANDIR=${PREFIX}/${PKGMANDIR} VERSION=${PKGVERSION}

.include "../../biology/biolibc/buildlink3.mk"
.include "../../mk/bsd.pkg.mk"
@


1.10
log
@biology/vcf-split: Update to 0.1.5.19

Unbreak when using non-default PKGMANDIR
@
text
@d1 1
a1 1
# $NetBSD$
d8 1
a8 1
OWNER=		bacon@@NetBSD.org
@


1.9
log
@biology/vcf-split: Update to 0.1.5.10

Updates for new libxtend API
@
text
@d3 1
a3 1
DISTNAME=	vcf-split-0.1.5.10
d6 1
a6 1
GITHUB_TAG=	0f2fd0a5051e058b82efd310679265bcda0b5b03
d13 1
a13 4
MAKE_ENV+=	VERSION=${PKGVERSION}

pre-build:
	cd ${WRKSRC} && ${MAKE} PREFIX=${PREFIX} depend
@


1.8
log
@Change MAINTAINER= to OWNER= on mission-critical packages
@
text
@d1 1
a1 1
# $NetBSD: Makefile,v 1.7 2022/12/11 21:18:27 bacon Exp $
d3 1
a3 1
DISTNAME=	vcf-split-0.1.5.4
d6 1
a6 1
GITHUB_TAG=	0a856b934cd483f5c10d93117aab6c7f887204e5
@


1.7
log
@biology/vcf-split: Update to 0.1.5.4

Update for biolibc API changes
@
text
@d1 1
a1 1
# $NetBSD$
d8 1
a8 1
MAINTAINER=	bacon@@NetBSD.org
@


1.6
log
@biology/vcf-split: Update to 0.1.5

Use latest biolibc API
Minor build system improvements
https://github.com/auerlab/vcf-split/releases
@
text
@d3 1
a3 1
DISTNAME=	vcf-split-0.1.5
d6 1
@


1.5
log
@biology/vcf-split: Update to 0.1.4

Minor update for biolibc 0.2.2 API changes
@
text
@d3 1
a3 1
DISTNAME=	vcf-split-0.1.4
@


1.4
log
@biology/vcf-split: Update to 0.1.3.3

Transfer header from multi-sample input
Updates for evolving libxtend and biolibc APIs
Add --version flag
Numerous minor fixes and enhancements
@
text
@d3 1
a3 1
DISTNAME=	vcf-split-0.1.3.3
a5 1
GITHUB_TAG=	19713a4e0f739840335ced2e170b822398688146
@


1.3
log
@biology/vcf-split: Update to 0.1.2.14

Updates for libxtend and biolibc API changes
@
text
@d3 1
a3 1
DISTNAME=	vcf-split-0.1.2.14
d6 1
a6 1
GITHUB_TAG=	bc2eba0b5d5f41443795d7bd465569ba5da27315
d13 2
a17 1
.include "../../devel/libxtend/buildlink3.mk"
@


1.2
log
@biology/vcf-split: Update to 0.1.2

Updates for new biolibc API

Upstream change log: https://github.com/auerlab/vcf-split/releases
@
text
@d3 1
a3 1
DISTNAME=	vcf-split-0.1.2
d6 1
@


1.1
log
@biology/vcf-split: import vcf-split-0.1.1

Vcf-split splits a multi-sample VCF into single-sample VCFs, writing thousands
of output files simultaneously.  Parsing the TOPMed human chromosome 1 BCF
with bcftools takes two days, so extracting the 137,977 samples one at a time
or using thousands of parallel readers of the same file is impractical.
Vcf-split solves this by generating thousands of single-sample outputs during
a single sweep through the multi-sample input.
@
text
@d3 1
a3 1
DISTNAME=	vcf-split-0.1.1
d15 1
@