head 1.6; access; symbols pkgsrc-2026Q1:1.6.0.12 pkgsrc-2026Q1-base:1.6 pkgsrc-2025Q4:1.6.0.10 pkgsrc-2025Q4-base:1.6 pkgsrc-2025Q3:1.6.0.8 pkgsrc-2025Q3-base:1.6 pkgsrc-2025Q2:1.6.0.6 pkgsrc-2025Q2-base:1.6 pkgsrc-2025Q1:1.6.0.4 pkgsrc-2025Q1-base:1.6 pkgsrc-2024Q4:1.6.0.2 pkgsrc-2024Q4-base:1.6 pkgsrc-2024Q3:1.5.0.20 pkgsrc-2024Q3-base:1.5 pkgsrc-2024Q2:1.5.0.18 pkgsrc-2024Q2-base:1.5 pkgsrc-2024Q1:1.5.0.16 pkgsrc-2024Q1-base:1.5 pkgsrc-2023Q4:1.5.0.14 pkgsrc-2023Q4-base:1.5 pkgsrc-2023Q3:1.5.0.12 pkgsrc-2023Q3-base:1.5 pkgsrc-2023Q2:1.5.0.10 pkgsrc-2023Q2-base:1.5 pkgsrc-2023Q1:1.5.0.8 pkgsrc-2023Q1-base:1.5 pkgsrc-2022Q4:1.5.0.6 pkgsrc-2022Q4-base:1.5 pkgsrc-2022Q3:1.5.0.4 pkgsrc-2022Q3-base:1.5 pkgsrc-2022Q2:1.5.0.2 pkgsrc-2022Q2-base:1.5 pkgsrc-2022Q1:1.4.0.22 pkgsrc-2022Q1-base:1.4 pkgsrc-2021Q4:1.4.0.20 pkgsrc-2021Q4-base:1.4 pkgsrc-2021Q3:1.4.0.18 pkgsrc-2021Q3-base:1.4 pkgsrc-2021Q2:1.4.0.16 pkgsrc-2021Q2-base:1.4 pkgsrc-2021Q1:1.4.0.14 pkgsrc-2021Q1-base:1.4 pkgsrc-2020Q4:1.4.0.12 pkgsrc-2020Q4-base:1.4 pkgsrc-2020Q3:1.4.0.10 pkgsrc-2020Q3-base:1.4 pkgsrc-2020Q2:1.4.0.8 pkgsrc-2020Q2-base:1.4 pkgsrc-2020Q1:1.4.0.4 pkgsrc-2020Q1-base:1.4 pkgsrc-2019Q4:1.4.0.6 pkgsrc-2019Q4-base:1.4 pkgsrc-2019Q3:1.4.0.2 pkgsrc-2019Q3-base:1.4 pkgsrc-2019Q2:1.2.0.8 pkgsrc-2019Q2-base:1.2 pkgsrc-2019Q1:1.2.0.6 pkgsrc-2019Q1-base:1.2 pkgsrc-2018Q4:1.2.0.4 pkgsrc-2018Q4-base:1.2 pkgsrc-2018Q3:1.2.0.2 pkgsrc-2018Q3-base:1.2 pkgsrc-2018Q2:1.1.0.4 pkgsrc-2018Q2-base:1.1 pkgsrc-2018Q1:1.1.0.2 pkgsrc-2018Q1-base:1.1; locks; strict; comment @# @; 1.6 date 2024.11.01.23.02.56; author mef; state Exp; branches; next 1.5; commitid U1tdbcaw4PFxSZvF; 1.5 date 2022.05.29.00.35.45; author wen; state Exp; branches; next 1.4; commitid RoYscLoobx95WSFD; 1.4 date 2019.08.08.19.53.48; author brook; state Exp; branches; next 1.3; commitid K2VPfA0XCw7xfgyB; 1.3 date 2019.07.31.19.15.51; author brook; state Exp; branches; next 1.2; commitid 3HPrxP0CMvm1lexB; 1.2 date 2018.07.28.14.40.47; author brook; state Exp; branches; next 1.1; commitid hIRYb3oU4xMfBULA; 1.1 date 2018.03.04.01.03.32; author minskim; state Exp; branches; next ; commitid L88ej3IDOeJIO4tA; desc @@ 1.6 log @(math/R-coda) Updated 0.19.4 to 0.19.4.1, make test passed Explicit change Not described, easy check shows trimmed white space at the end of line in following files diff -urN coda-0.9.14/R/gelman.R coda/R/gelman.R diff -urN coda-0.9.14/R/output.R coda/R/output.R diff -urN coda-0.9.14/R/util.R coda/R/util.R 0.19-4 Martyn Plummer - Fix cumuplot, affected by changes in matplot in R 4.0.0. @ text @# $NetBSD: Makefile,v 1.5 2022/05/29 00:35:45 wen Exp $ R_PKGNAME= coda R_PKGVER= 0.19-4.1 MAINTAINER= minskim@@NetBSD.org COMMENT= Output analysis and diagnostics for MCMC LICENSE= gnu-gpl-v2 OR gnu-gpl-v3 TEST_DEPENDS+= tex-ec-[0-9]*:../../fonts/tex-ec TEST_DEPENDS+= tex-inconsolata-[0-9]*:../../fonts/tex-inconsolata TEST_DEPENDS+= tex-latex-bin-[0-9]*:../../print/tex-latex-bin TEST_DEPENDS+= tex-url-[0-9]*:../../print/tex-url TEST_DEPENDS+= tex-xkeyval-[0-9]*:../../print/tex-xkeyval USE_LANGUAGES+= # none .include "../../math/R/Makefile.extension" .include "../../mk/bsd.pkg.mk" @ 1.5 log @Update to 0.19.4 Upstream changes: 0.19-4 Martyn Plummer - Fix cumuplot, affected by changes in matplot in R 4.0.0. @ text @d1 1 a1 1 # $NetBSD: Makefile,v 1.4 2019/08/08 19:53:48 brook Exp $ d4 1 a4 2 R_PKGVER= 0.19-4 CATEGORIES= math d10 6 @ 1.4 log @Update all R packages to canonical form. The canonical form [1] of an R package Makefile includes the following: - The first stanza includes R_PKGNAME, R_PKGVER, PKGREVISION (as needed), and CATEGORIES. - HOMEPAGE is not present but defined in math/R/Makefile.extension to refer to the CRAN web page describing the package. Other relevant web pages are often linked from there via the URL field. This updates all current R packages to this form, which will make regular updates _much_ easier, especially using pkgtools/R2pkg. [1] http://mail-index.netbsd.org/tech-pkg/2019/08/02/msg021711.html @ text @d1 1 a1 1 # $NetBSD: Makefile,v 1.3 2019/07/31 19:15:51 brook Exp $ d4 1 a4 1 R_PKGVER= 0.19-3 @ 1.3 log @R-coda: update to version 0.19.3. Update to the canonical form of an R package and fix the LICENSE field. @ text @d1 1 a1 1 # $NetBSD: Makefile,v 1.2 2018/07/28 14:40:47 brook Exp $ d3 3 a5 1 CATEGORIES= math R a7 1 HOMEPAGE= ${R_HOMEPAGE_BASE}/coda/ a10 3 R_PKGNAME= coda R_PKGVER= 0.19-3 @ 1.2 log @Remove MASTER_SITES= from individual R package Makefiles. Each R package should include ../../math/R/Makefile.extension, which also defines MASTER_SITES. Consequently, it is redundant for the individual packages to do the same. Package-specific definitions also prevent redefining MASTER_SITES in a single common place. @ text @d1 1 a1 1 # $NetBSD: Makefile,v 1.1 2018/03/04 01:03:32 minskim Exp $ d3 1 a3 1 CATEGORIES= math d8 1 a8 1 LICENSE= gnu-gpl-v2 d11 1 a11 1 R_PKGVER= 0.19-1 @ 1.1 log @math/R-coda: Import version 0.19.1 coda provides functions for summarizing and plotting the output from Markov Chain Monte Carlo (MCMC) simulations, as well as diagnostic tests of convergence to the equilibrium distribution of the Markov chain. @ text @d1 1 a1 1 # $NetBSD$ a3 1 MASTER_SITES= ${MASTER_SITE_R_CRAN:=contrib/} @